FastQCFastQC Report
Sun 21 May 2023
EGAF00007935207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426822
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21540.504660022210664No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7280.17056290444260136No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5020.11761343136014543No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4930.1155048240250034No Hit
GCCCTGATGCAGGCATACGGCGGCGGTGGTT4880.11433337550548005No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC4820.11292763728205202No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4610.1080075535000539No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4420.10355604912586512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)