FastQCFastQC Report
Sun 21 May 2023
EGAF00007935215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences451342
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28770.6374323683592487No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19490.4318233180160499No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15020.33278533794772036No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6940.1537636648040732No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5870.1300565868011397No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5180.11476884491139756No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4960.10989449242481311No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4670.10346920960158815No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)