FastQCFastQC Report
Sun 21 May 2023
EGAF00007935223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474097
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23400.493569881269023No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17020.3589982640683236No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5610.11833021512475295No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5600.11811928782506534No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)