FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458440
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22640.4938487043015444No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20360.4441148241863712No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6290.13720443242299973No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4770.1040485123462176No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4640.10121280865544019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)