FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462314
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGAAGT13070.28270828917142893No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT9400.2033250128700407No Hit
CTGAACAACATCGGTACCCTGAGAAGGCGGTGCGCCCTGAAACA7060.1527100628577114No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)