FastQCFastQC Report
Sun 21 May 2023
EGAF00007935249

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935249
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences419693
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42041.0016845646698895No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14950.3562127555141496No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG12780.3045082953492195No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12550.2990280991105403No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9740.2320743972379811No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9230.21992265775221412No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG8390.19990802801095087No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8310.1980018727974972No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7680.18299090049154976No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7170.17083916100578278No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6760.1610701155368329No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6740.16059357673346947No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6120.14582087382920372No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5990.14272337160734155No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5740.13676663656529892No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5670.13509875075352698No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5190.12366181947280512No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG4950.1179433538324442No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCC4680.11151007998703814No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC4500.10722123075676744No Hit

[OK]Adapter Content

Adapter graph