FastQCFastQC Report
Sun 21 May 2023
EGAF00007935265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517695
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA36400.7031166999874444No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT20190.38999797177875006No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA19880.3840098899931427No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA16490.3185273182085977No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13980.2700431721380349No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10670.20610591178203383No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)