FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446775
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38310.8574785966090314No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT37140.8312909182474401No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7680.17189860668121537No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5720.1280286497677802No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5590.1251189077276034No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT4760.10654132393262829No Hit
GATGGCGAACACCGTCGTCACCGTGCCCACC4530.10139331878462313No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT4520.10116949247384031No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)