FastQCFastQC Report
Sun 21 May 2023
EGAF00007935295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458803
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24540.5348700858538414No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22090.48147026065653453No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT17150.37379877638114833No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15410.3358740025675508No Hit
CAGCGCGGTGATCCGTTCGACAAAAACTACG7820.1704435236909959No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7660.16695618816790647No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7490.163250894174624No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6490.14145504715531504No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5810.12663387118218494No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC5570.1214028678975508No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC4940.10767148427538616No Hit
ATGATGGACCCGAACTCTACCAGCGAAGACG4620.10069681322920732No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4590.10004293781862804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)