FastQCFastQC Report
Wed 31 May 2023
EGAF00007935341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462150
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGAAGTGATTGACGTTGAAACCACTGAAG41750.9033863464243211No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38570.8345775181218219No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA35510.7683652493779076No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA20040.43362544628367417No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA18500.4003029319485016No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA16180.3501027804825273No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC13110.28367413177539763No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC11170.2416964189116088No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA9960.21551444336254463No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8820.19084712755598832No Hit
ACTAGCGAACCGTGCGAAGCGCTGGACCTGT8240.17829708968949476No Hit
ATTGAAGTTATCGACGTTGAAACCACTGAAG7970.1724548306826788No Hit
CGCGAAATGATCCGTTATATGGCACTGGTTT7590.16423239208049334No Hit
GAAAACGTACTGATCGAGCTGAGCGATTCCT7240.15665909336795414No Hit
ACCCTGTCCCTGTCTCAGCTGTACTCCCACA7160.15492805366223086No Hit
GCACTGGTAAGCGCTATGGAACGTACTGAAC6110.1322081575246132No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5460.1181434599156118No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5410.11706156009953478No Hit
CCGTGGCAGCCGCTGCCGGGTCCGCAGGTGA5360.11597966028345774No Hit
CAGCGTCCGCGCGGCGCTCCGACCCCGACCC5010.10840636157091854No Hit

[OK]Adapter Content

Adapter graph