FastQCFastQC Report
Wed 31 May 2023
EGAF00007935377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406186
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG37680.9276538334654567No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10360.25505556567680815No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8560.21074089210361754No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4770.11743388496895511No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4110.10118517132545188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)