FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007935379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences395169
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33970.8596322079920237No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15580.3942616956289588No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11890.3008839256115738No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6140.15537656040833162No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6120.15487044783371165No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5640.1427237460428323No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5500.13918095802049252No Hit
CGTGTTCACATGCTGATGCCAGGCTGGTACC4460.11286310414025391No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4420.11185087899101398No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4380.11083865384177403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)