FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences372025
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25890.6959209730528862No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10350.2782071097372488No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG8310.22337208520932733No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7270.19541697466568106No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG6020.161817082185337No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5510.14810832605335664No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5350.14380753981587258No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5230.14058195013775956No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4670.12552919830656542No Hit
GAACGTACCACTGACGGTAAACTGGATCCGC4490.12069081378939586No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC4140.11128284389489954No Hit
TCTCGCGTGCCGGCGAAGAAACCGCGTAAAC3760.10106847658087495No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)