FastQCFastQC Report
Wed 31 May 2023
EGAF00007935397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences355620
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33270.9355491817108149No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23040.6478825712839548No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9480.26657668297621057No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAG7070.19880771610145662No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5180.1456610989258197No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG5170.14537989989314437No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5140.14453630279511837No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4790.13469433665148192No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4610.12963275406332603No Hit
GAACGTACCACTGACGGTAAACTGGATCCGC4040.11360440920083234No Hit
TCCCGCGTTCCGGCTAAAAAACCGCGTAAAC3800.10685563241662449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)