FastQCFastQC Report
Sun 21 May 2023
EGAF00007935403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497164
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30180.6070431487396513No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27230.5477065917886251No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC12790.2572591740351272No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10730.2158241546049191No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5850.11766740954695032No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5370.10801264773796977No Hit
AACTACCCGCGTGATTCTAAAACCATTATCA5130.1031852668334795No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)