FastQCFastQC Report
Sun 21 May 2023
EGAF00007935411

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935411
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458162
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG65961.4396654458466656No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15800.34485618623980163No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7820.17068198584780056No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7260.15845923494309874No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6120.13357720631567No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5850.12768409427233163No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5450.11895355791183031No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4880.10651254359811595No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)