FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007935413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457205
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28610.6257586859286316No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG12220.2672761671460286No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11930.26093327938233396No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6820.14916722258068044No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6800.14872978204525322No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6260.1369188875887184No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5830.12751391607703327No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5520.12073358777791145No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4630.10126748395140035No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4580.10017388261283232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)