FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007935415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422742
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58821.391392385899674No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG10810.25571152144806997No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10280.24317432381925616No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6850.16203736557995185No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6480.15328498232964788No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5560.13152229965321638No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4930.11661959303783395No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4830.1142540840512653No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4420.10455549720633389No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)