FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538245
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33160.6160763221209672No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15530.28853031611998253No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8750.1625653745041756No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7090.13172440059824056No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6110.1135170786537729No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5580.1036702616838057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)