FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495342
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70041.4139725684476583No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14800.29878346677648976No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7420.14979549482983473No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5540.11184191932038874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)