FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505907
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12430.2456973317230242No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA11950.23620942188979396No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10570.20893168111925708No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5490.10851796871757062No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5290.1045646729537247No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)