FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466523
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46600.9988789405881382No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG25210.5403806457559435No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16210.3474641121659597No Hit
CAGTCCCAACCGCAGCGTCGTAAACGTCGCG13070.28015767711345424No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8200.17576839727087412No Hit
CCGCAGCTGCAGACTACCGGTCGTCCGTCTC6960.14918878597625412No Hit
CGTTGGAGCCGTTCTCCGTCTGAAGGTCGCG6600.14147212463265477No Hit
CAGCCGCAGCGCCGTAAACGTCGTGCGGCTC6520.13975731100074382No Hit
GGCACTCTGGATCAGACCAACGGTCTGTTCG5710.12239482297764526No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5590.1198226025297788No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA4960.10631844517847995No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4940.10588974177050221No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)