FastQCFastQC Report
Wed 31 May 2023
EGAF00007935459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506659
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49780.982514867001277No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT35570.7020500968106754No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18200.35921596182047494No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14450.28520168397284956No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8000.15789712607493403No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7900.15592341199899734No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7500.14802855569525064No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7150.1411205564294723No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7050.1391468423535356No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6890.13598889983203694No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6810.13440992857128758No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC6670.13164672886497625No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6590.1300677576042269No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC6540.12908090056625857No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6500.1282914149358839No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6440.12710718649032188No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6320.12473872959919788No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC6100.12039655863213719No Hit
GACAAAGCTGAAGCACAGTCCACTCCGGAAC6060.11960707300176251No Hit
TTCGGCGGTGGCATCGAAGCACTGGATGGCG5100.10065941787277045No Hit

[OK]Adapter Content

Adapter graph