FastQCFastQC Report
Sun 21 May 2023
EGAF00007935491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505220
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG51651.0223269070899805No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33720.6674320098175053No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC18260.3614267051977356No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17410.3446023514508531No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA11620.22999881239855902No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT11360.22485253948774792No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11000.2177269308420094No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG10270.2032777799770397No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8760.1733898103796366No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7930.1569613237797395No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG7680.15201298444242112No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC7120.1409287043268279No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7120.1409287043268279No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5910.11697874193420688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)