FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007935499

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935499
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424538
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42841.0090969477408382No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18970.4468386811074627No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10130.23861232681173417No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6280.14792550961280262No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4650.1095308311623459No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4510.10623312871874838No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4260.1003443743551814No Hit

[OK]Adapter Content

Adapter graph