FastQCFastQC Report
Sun 21 May 2023
EGAF00007935501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431069
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41700.9673625336083087No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19840.46025114308846143No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10170.23592510711742204No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5990.13895687233366352No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4680.1085673059301411No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4680.1085673059301411No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)