FastQCFastQC Report
Wed 31 May 2023
EGAF00007935509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences434671
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23220.534197128402861No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11920.2742303949423817No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7100.1633419298733985No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4690.10789769733890689No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)