FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences414752
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42341.0208510145822083No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22230.5359829488465396No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6900.16636447804953322No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4360.10512306149216882No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)