FastQCFastQC Report
Wed 31 May 2023
EGAF00007935513

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935513
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences421147
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11080.263091034721843No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10480.24884422778744714No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6310.14982891959339611No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5580.1324953044898812No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5430.12893360275628227No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4900.11634892329756594No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4640.11017530695932773No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG4330.1028144567098899No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)