FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences403272
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39870.9886627387966436No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10820.26830526294907653No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6360.15770993275010414No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5720.14183975083814399No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5210.12919319962705073No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4440.11009938701422364No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4370.10836358586760302No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4210.10439604038961296No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)