FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences372718
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30780.8258254229739375No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27450.7364817368627219No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14810.39735134874087114No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8320.22322506559919295No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6610.1773458754339742No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6480.17385798378398684No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5200.13951566599949558No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5170.1387107679264216No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5160.13844246856873024No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4760.12771049426107675No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4460.1196615135303366No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA3950.10597824628807838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)