FastQCFastQC Report
Sun 21 May 2023
EGAF00007935810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423331
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGAAGTGATTGACGTTGAAACCACTGAAG25090.5926804320968698No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA22610.53409743203309No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA15260.36047442781180683No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13080.3089780809815487No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC10570.24968641559441665No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC8000.18897741956058026No Hit
ACTAGCGAACCGTGCGAAGCGCTGGACCTGT6770.15992214130314103No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6050.14291417354268882No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5940.14031573402373082No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4470.10559113317947422No Hit
GAAAACGTACTGATCGAGCTGAGCGATTCCT4320.10204780656271333No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)