FastQCFastQC Report
Sun 21 May 2023
EGAF00007935836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences499567
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40270.8060980809380924No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11000.2201906851333255No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6990.13992117173472227No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6520.1305130242790256No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC5400.1080936090654507No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5390.10789343571532947No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)