FastQCFastQC Report
Wed 31 May 2023
EGAF00007935870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences535998
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45550.8498166037932977No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10380.19365743902029484No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8000.14925428826226964No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7530.1404855988268613No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7250.13526169873768187No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)