FastQCFastQC Report
Wed 31 May 2023
EGAF00007935910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386165
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63301.6391956806028511No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11390.29495163984307227No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6890.1784211412220165No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4920.1274066784923543No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4830.1250760685199332No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4020.10410057876814316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)