FastQCFastQC Report
Sun 21 May 2023
EGAF00007935912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences403143
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA28560.7084334839002537No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20860.5174342602996951No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA13030.3232103744825037No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA10540.26144569048699845No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8200.2034017705876079No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6910.17140319936102077No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6430.1594967542534535No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)