FastQCFastQC Report
Sun 21 May 2023
EGAF00007935918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400124
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21600.5398326518779178No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13700.34239385790404975No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11270.281662684567784No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10020.2504223690655896No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9940.24842298887344924No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7170.17919444972058662No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6250.15620157751097158No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5120.12796033229698794No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4480.11196529075986446No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4150.10371784746728516No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4060.10146854475112715No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)