FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442335
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT15810.35742141137373257No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA12400.28033051872449616No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA10770.24348061989216316No Hit
ACGATCGCCGAAGCGGCTGGATTTGGAAGTACCGGTGCCGAAAC10510.23760272191890763No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT9030.20414391807114518No Hit
GGACTGGTCCGGCAGGGTATCCGGGAAAGCCGCACGTGCCGCAC9000.2034656990742311No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT6300.14242598935196174No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT5960.13473950738693524No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)