FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461257
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT43290.9385223422083567No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG16520.35815174620656165No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13510.29289528397401016No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7270.15761278419622898No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6990.15154241561645676No Hit
CGTCGTGAACACGGTGGCCACGACGATGATC4940.10709864565741006No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC4700.10189547258903388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)