FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007935946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences415648
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59411.429334436831165No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18510.4453287397028255No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4810.11572291939333282No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4430.10658056817306953No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4420.1063399799830626No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)