FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461949
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39420.8533409532221089No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG18020.39008635152365306No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA10310.223184810444443No Hit
GCGAAAACTGCGGCGGCCAAACCGGCTGCCA7160.15499546486733384No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6490.14049169930013922No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA5790.12533851139411495No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5590.12100902913525086No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGG4880.1056393671162834No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)