FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527323
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47700.9045689264454614No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18830.35708664329073453No Hit
CGTTCTCGCCACGAGAACACCTCTCAGGTTC9420.17863814019111626No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8160.15474386666236822No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7800.14791693136844022No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6020.11416152908179616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)