FastQCFastQC Report
Wed 31 May 2023
EGAF00007936036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences550529
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT29310.5323970217736033No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17740.32223552256102767No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11120.20198754289056528No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10940.19871796036176115No Hit
CCGCCGGGTCTGAAGGGTGCAAAAGGTGAAC7820.1420451965291565No Hit
GAAGTCTCCATTGCCGAACCGACCACTTACA7160.13005672725687475No Hit
TCCTCCAACAGCCCGCACGTGGTTAAAACCG5600.10172034534057244No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)