FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007936056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455945
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17640.3868887694787749No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10580.23204553180756451No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6730.14760552259592716No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT4660.10220530985096887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)