FastQCFastQC Report
Sun 21 May 2023
EGAF00007936058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497000
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32500.653923541247485No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG10470.21066398390342053No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9280.18672032193158952No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7110.1430583501006036No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6810.1370221327967807No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6560.13199195171026157No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5490.11046277665995975No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)