FastQCFastQC Report
Sun 21 May 2023
EGAF00007936078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences469533
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12330.2626013507037844No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11790.25110056162186684No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10920.23257151254544411No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10610.22596920770212103No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9420.2006248762067842No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6940.1478064374601998No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6660.14184306534364996No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)