FastQCFastQC Report
Sun 21 May 2023
EGAF00007936080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457131
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42490.929492858721023No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11920.26075676337855014No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10970.23997497435089724No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10570.23122474739188545No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10150.22203700908492316No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6980.152691460434755No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5940.12994087034132448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)