FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513131
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48710.9492702643184683No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21680.42250419483523705No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7590.14791544459407052No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7360.1434331583942502No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5420.10562604870880926No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5320.10367722862193085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)