FastQCFastQC Report
Wed 31 May 2023
EGAF00007936116

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936116
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478942
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16390.3422126269986762No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12830.26788212351391194No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9510.19856266520789576No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5790.1208914649372993No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5060.10564953585194031No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)