FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences577711
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG18740.32438364510975215No Hit
CTGTCCTCCATGGCTATCACCTTCAAACGCGCG8750.1514598129514584No Hit
GCCGTCGCGAACAGCAACAACGACACCGCTAAA8630.14938264980240984No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7680.13293844153910866No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG7330.12688004902105032No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7000.12116785036116674No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC6760.1170135240630696No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT6640.11493636091402103No Hit
CCGGATTTTGAACAGAACATTGCGACCACCACC6600.1142439731976715No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6570.11372468241040935No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC6400.11078203461592388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)